Alleles that increase mutation rates are generally selected against because they are associated with the deleterious mutations they cause. Therefore, we would expect mutation rates to evolve to the minimal achievable level, even if this should reduce genetic variation and increase the possibility of a species’ extinction.
Asexual populations have a high extinction rate, so sex has a group-level advantage in the long term. But this is unlikely to offset the short-term advantage of asexual reproduction.
In a constant environment, alleles that decrease the recombination rate are advantageous because they lower the proportion of offspring with unfit recombinant genotypes. In addition, asexual reproduction has approximately a twofold advantage over sexual reproduction because only half of the offspring of sexuals (i.e., the females) contribute to population growth, whereas all of the (all-female) offspring of asexuals do so. Therefore, the prevalence of recombination and sex requires explanation.
Among the several hypotheses for the short-term advantage of sex are: (a) in asexual populations, fitness declines because genotypes with few deleterious mutations, if lost by genetic drift, cannot be reconstituted, as they are in populations with recombination (Muller’s ratchet); (b) deleterious mutations can be more effectively purged by natural selection in sexual than in asexual populations, thus maintaining higher mean fitness; (c) recombination enables the mean of a polygenic character to evolve to new, changing optima in a fluctuating environment; (d) the rate of adaptation, by fixing combinations of advantageous mutations, may be higher in sexual than asexual populations, if the populations are large.
In large, randomly mating populations, a 1:1 sex ratio is an evolutionarily stable strategy, because if the population sex ratio deviates from 1:1, a genotype that produces a greater proportion of the minority sex has higher fitness. If, however, populations are characteristically subdivided into small local groups whose offspring then colonize patches of habitat anew, a female-biased sex ratio can evolve because female-biased groups contribute a greater proportion of offspring to the population as a whole.
The evolution of hermaphroditism versus dioecy (separate sexes) depends on how reproductive success via female or male function is related to the allocation of an individual’s energy or resources. Dioecy is advantageous if the reproductive “payoff” from one or the other sexual function increases disproportionately with allocation to that function.
Outcrossing can be advantageous because it prevents inbreeding depression in an individual’s progeny. Conversely, self-fertilization may evolve if fewer resources need to be expended on reproduction, if an allele for selfing becomes associated with advantageous homozygous genotypes, or if selfing ensures reproduction despite low population density or scarcity of pollinators.
Differences between the sexes in the size and number of gametes give rise to conflicts of reproductive interest and to sexual selection, in which individuals of one sex compete for mates (or for opportunities to fertilize eggs). The several forms of sexual selection include direct competition between males, or between their sperm, and female choice among male phenotypes.
Females may prefer certain male phenotypes because of sensory bias, direct contributions of the male to the fitness of the female or her offspring, or indirect contributions to female or offspring fitness. Indirect benefits may include fathering offspring that are genetically superior with respect to mating success (“runaway sexual selection”) or with respect to components of viability (“good genes models”). Sexually selected male features may also evolve by antagonistic coevolution: selection on females to resist mating, and on males to overcome female resistance with irresistible stimuli.
The evolution of reproductive effort by males is governed by similar principles as in females. Delayed maturation may evolve if larger males are more successful in attracting or competing for mates. Similar principles explain phenomena such as sequential hermaphroditism (sex change with age) and alternative mating strategies.
The evolution of features of genetic systems, such as rates of mutation and recombination, sexual versus asexual reproduction, and rates of inbreeding, can usually be understood best as consequences of selection at the level of genes and individual organisms, rather than group selection.